{
  "_id": "6a1ed71cb401979e7340ecc3",
  "Package": "BAT",
  "Title": "Biodiversity Assessment Tools",
  "Version": "2.11.1",
  "Date": "2026-03-30",
  "Authors@R": "c(\nperson(\"Pedro\", \"Cardoso\", email = \"pmcardoso@ciencias.ulisboa.pt\", role = c(\"aut\", \"cre\")),\nperson(\"Stefano\", \"Mammola\", role = c(\"aut\")),\nperson(\"Francois\", \"Rigal\", role = c(\"aut\")),\nperson(\"Renato\", \"Hilario\", role = c(\"aut\")),\nperson(\"Jose\", \"Carvalho\", role = c(\"aut\")))",
  "Description": "Includes algorithms to assess alpha and beta diversity in\nall their dimensions (taxonomic, phylogenetic and functional).\nIt allows performing a number of analyses based on species\nidentities/abundances, phylogenetic/functional distances,\ntrees, convex-hulls or kernel density n-dimensional\nhypervolumes depicting species relationships. Cardoso et al.\n(2015) <doi:10.1111/2041-210X.12310>.",
  "Encoding": "UTF-8",
  "License": "GPL-3",
  "LazyData": "true",
  "RoxygenNote": "7.3.3",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-20 10:09:18 UTC",
    "User": "root"
  },
  "Author": "Pedro Cardoso [aut, cre], Stefano Mammola [aut], Francois Rigal\n[aut], Renato Hilario [aut], Jose Carvalho [aut]",
  "Maintainer": "Pedro Cardoso <pmcardoso@ciencias.ulisboa.pt>",
  "Config/pak/sysreqs": "libgdal-dev gdal-bin libgeos-dev libglpk-dev\nlibgmp3-dev libicu-dev libxml2-dev libproj-dev libsqlite3-dev",
  "Repository": "https://cardosopmb.r-universe.dev",
  "Date/Publication": "2026-03-30 17:15:34 UTC",
  "RemoteUrl": "https://github.com/cran/BAT",
  "RemoteRef": "HEAD",
  "RemoteSha": "ef56ebda8a77810795e58385f52253b45478b72d",
  "MD5sum": "dbee54f7888ee2bb58a40b14f4ba78ab",
  "_user": "cardosopmb",
  "_type": "src",
  "_file": "BAT_2.11.1.tar.gz",
  "_fileid": "53480777b782368bff07c67c965058c6eb14e3cce58ad208bca9ff0c5d1b5730",
  "_filesize": 513827,
  "_sha256": "53480777b782368bff07c67c965058c6eb14e3cce58ad208bca9ff0c5d1b5730",
  "_created": "2026-05-20T10:09:18.000Z",
  "_published": "2026-06-02T13:14:04.697Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79078743034,
      "time": 265,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7107235796"
    },
    {
      "job": 79078742809,
      "time": 272,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7107237833"
    },
    {
      "job": 79078743000,
      "time": 186,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7107207849"
    },
    {
      "job": 79078743123,
      "time": 155,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7107196226"
    },
    {
      "job": 79078742766,
      "time": 267,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7107138241"
    },
    {
      "job": 79078742071,
      "time": 138,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7358667950"
    },
    {
      "job": 79078742509,
      "time": 285,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7107250786"
    },
    {
      "job": 79078743117,
      "time": 244,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7107228343"
    },
    {
      "job": 79078743408,
      "time": 259,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7107232960"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cardosopmb/actions/runs/26155630915",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/BAT",
  "_commit": {
    "id": "ef56ebda8a77810795e58385f52253b45478b72d",
    "author": "Pedro Cardoso <pmcardoso@ciencias.ulisboa.pt>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 2.11.1\n",
    "time": 1774890934
  },
  "_maintainer": {
    "name": "Pedro Cardoso",
    "email": "pmcardoso@ciencias.ulisboa.pt",
    "login": "cardosopmb",
    "description": "Researcher @Ce3c - University of Lisbon, Portugal",
    "uuid": 7676226
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.0.0",
      "role": "Depends"
    },
    {
      "package": "ape",
      "role": "Imports"
    },
    {
      "package": "boot",
      "role": "Imports"
    },
    {
      "package": "geometry",
      "role": "Imports"
    },
    {
      "package": "graphics",
      "role": "Imports"
    },
    {
      "package": "hypervolume",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "nls2",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Imports"
    },
    {
      "package": "phytools",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "terra",
      "role": "Imports"
    },
    {
      "package": "TreeTools",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "vegan",
      "role": "Imports"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 5,
  "_updates": [
    {
      "week": "2025-22",
      "n": 1
    },
    {
      "week": "2025-31",
      "n": 1
    },
    {
      "week": "2026-14",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "2.10.0",
      "date": "2025-05-26"
    },
    {
      "name": "2.11.0",
      "date": "2025-07-29"
    },
    {
      "name": "2.11.1",
      "date": "2026-03-30"
    }
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "cardosopmb",
      "count": 3,
      "uuid": 7676226
    }
  ],
  "_userbio": {
    "uuid": 7676226,
    "type": "user",
    "name": "Pedro Cardoso",
    "description": "Researcher @cE3c - University of Lisbon, Portugal"
  },
  "_downloads": {
    "count": 1332,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/BAT"
  },
  "_mentions": 60,
  "_searchresults": 90,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/BAT.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "manual.pdf"
  ],
  "_realowner": "cardosopmb",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0",
      "date": "2014-08-19"
    },
    {
      "version": "1.0.1",
      "date": "2014-10-22"
    },
    {
      "version": "1.1",
      "date": "2015-01-13"
    },
    {
      "version": "1.2",
      "date": "2015-02-12"
    },
    {
      "version": "1.2.1",
      "date": "2015-03-05"
    },
    {
      "version": "1.3.0",
      "date": "2015-04-16"
    },
    {
      "version": "1.3.1",
      "date": "2015-07-08"
    },
    {
      "version": "1.4.0",
      "date": "2015-09-30"
    },
    {
      "version": "1.5.0",
      "date": "2016-04-21"
    },
    {
      "version": "1.5.1",
      "date": "2016-06-01"
    },
    {
      "version": "1.5.2",
      "date": "2016-07-15"
    },
    {
      "version": "1.5.3",
      "date": "2016-08-13"
    },
    {
      "version": "1.5.4",
      "date": "2016-09-15"
    },
    {
      "version": "1.5.5",
      "date": "2016-12-03"
    },
    {
      "version": "1.5.6",
      "date": "2017-06-27"
    },
    {
      "version": "1.6.0",
      "date": "2018-08-17"
    },
    {
      "version": "2.0.0",
      "date": "2020-01-22"
    },
    {
      "version": "2.0.1",
      "date": "2020-04-10"
    },
    {
      "version": "2.1.0",
      "date": "2020-08-12"
    },
    {
      "version": "2.1.1",
      "date": "2020-08-29"
    },
    {
      "version": "2.2.0",
      "date": "2020-09-30"
    },
    {
      "version": "2.2.1",
      "date": "2020-10-16"
    },
    {
      "version": "2.3.0",
      "date": "2020-10-28"
    },
    {
      "version": "2.4.0",
      "date": "2020-11-24"
    },
    {
      "version": "2.4.1",
      "date": "2020-12-17"
    },
    {
      "version": "2.4.2",
      "date": "2021-01-22"
    },
    {
      "version": "2.5.0",
      "date": "2021-02-23"
    },
    {
      "version": "2.5.1",
      "date": "2021-04-27"
    },
    {
      "version": "2.6.0",
      "date": "2021-05-12"
    },
    {
      "version": "2.6.1",
      "date": "2021-07-08"
    },
    {
      "version": "2.7.0",
      "date": "2021-08-02"
    },
    {
      "version": "2.7.1",
      "date": "2021-10-07"
    },
    {
      "version": "2.8.0",
      "date": "2022-02-25"
    },
    {
      "version": "2.8.1",
      "date": "2022-03-13"
    },
    {
      "version": "2.9.0",
      "date": "2022-07-08"
    },
    {
      "version": "2.9.2",
      "date": "2022-11-08"
    },
    {
      "version": "2.9.3",
      "date": "2023-08-10"
    },
    {
      "version": "2.9.4",
      "date": "2023-10-11"
    },
    {
      "version": "2.9.5",
      "date": "2023-12-04"
    },
    {
      "version": "2.9.6",
      "date": "2024-02-17"
    },
    {
      "version": "2.10.0",
      "date": "2025-05-27"
    },
    {
      "version": "2.11.0",
      "date": "2025-08-01"
    },
    {
      "version": "2.11.1",
      "date": "2026-03-30"
    }
  ],
  "_exports": [
    "accuracy",
    "aic",
    "alpha",
    "alpha.accum",
    "alpha.estimate",
    "beta",
    "beta.accum",
    "beta.evenness",
    "beta.multi",
    "contribution",
    "coverage",
    "cwd",
    "cwe",
    "cwm",
    "dispersion",
    "dummy",
    "evenness",
    "evenness.contribution",
    "fill",
    "gamma",
    "gdm",
    "gower",
    "hill",
    "hull.alpha",
    "hull.beta",
    "hull.build",
    "hull.contribution",
    "hull.gamma",
    "hull.sad",
    "hyper.arrangement",
    "hyper.build",
    "hyper.quality",
    "iaor",
    "kernel.alpha",
    "kernel.arrangement",
    "kernel.bandwidth",
    "kernel.beta",
    "kernel.beta.evenness",
    "kernel.build",
    "kernel.contribution",
    "kernel.dispersion",
    "kernel.evenness",
    "kernel.evenness.contribution",
    "kernel.gamma",
    "kernel.hotspots",
    "kernel.originality",
    "kernel.sad",
    "kernel.similarity",
    "linnean",
    "mixture",
    "optim.alpha",
    "optim.alpha.stats",
    "optim.beta",
    "optim.beta.stats",
    "optim.spatial",
    "originality",
    "r2",
    "rao",
    "raster.alpha",
    "raster.beta",
    "raster.dispersion",
    "raster.evenness",
    "sad",
    "sar",
    "ses",
    "sim.plot",
    "sim.sad",
    "sim.sample",
    "sim.spatial",
    "sim.tree",
    "slope",
    "standard",
    "tree.addTip",
    "tree.build",
    "tree.quality",
    "tree.zero",
    "uniqueness"
  ],
  "_datasets": [
    {
      "name": "arrabida",
      "title": "Sample data of spiders in Arrabida (Portugal)",
      "object": "arrabida",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Aculepeira armida",
        "Aelurillus luctuosus",
        "Aelurillus v-insignitus",
        "Agalenatea redii",
        "Agroeca inopina",
        "Agyneta fuscipalpa",
        "Agyneta pseudorurestris",
        "Alopecosa albofasciata",
        "Alopecosa pulverulenta",
        "Alopecosa sp. 466",
        "Anelosimus pulchellus",
        "Anelosimus vittatus",
        "Anyphaena accentuata",
        "Anyphaena sabina",
        "Apostenus sp. 418",
        "Araeoncus humilis",
        "Araneus sturmi",
        "Araneus triguttatus",
        "Araniella cucurbitina",
        "Araniella opisthographa",
        "Archaeodictyna consecuta",
        "Arctosa leopardus",
        "Arctosa sp. 419",
        "Argyrodes argyrodes",
        "Ariadna insidiatrix",
        "Atypus affinis",
        "Ballus chalybeius",
        "Bassaniana versicolor",
        "Callilepis concolor",
        "Callilepis nocturna",
        "Callilepis schuszteri",
        "Callobius sp. 438",
        "Centromerus dilutus",
        "Centromerus sp. 443",
        "Cercidia prominens",
        "Cetonana sp. 456",
        "Chalcoscirtus infimus",
        "Cheiracanthium elegans",
        "Cheiracanthium sp. 208",
        "Cheiracanthium sp. 432",
        "Cheiracanthium striolatum",
        "Civizelotes medianus",
        "Clubiona brevipes",
        "Clubiona comta",
        "Clubiona corticalis",
        "Clubiona diniensis",
        "Clubiona genevensis",
        "Clubiona leucaspis",
        "Clubiona sp. 289",
        "Clubiona terrestris",
        "Crustulina guttata",
        "Cyclosa algerica",
        "Cyclosa conica",
        "Cyclosa insulana",
        "Cyrba algerina",
        "Cyrtophora citricola",
        "Diaea dorsata",
        "Dictyna civica",
        "Didectoprocnemis cirtensis",
        "Diplocephalus graecus",
        "Diplocephalus sp. 427",
        "Dipoena cf. nigroreticulata",
        "Dipoena erythropus",
        "Dipoena melanogaster",
        "Dipoena sp. 435",
        "Dipoena sp. 450",
        "Dipoena torva",
        "Drassodes fugax",
        "Drassodes lapidosus",
        "Drassodes lutescens",
        "Drassodes sp. 448",
        "Drassodes sp. 467",
        "Drassyllus sp. 444",
        "Dysdera alentejana",
        "Dysdera falciformis",
        "Dysdera fuscipes",
        "Dysdera lusitanica",
        "Dysdera machadoi",
        "Dysdera sp.",
        "Dysdera sp. 445",
        "Ebrechtella tricuspidata",
        "Echemus angustifrons",
        "Enoplognatha latimana",
        "Episinus angulatus",
        "Episinus maculipes",
        "Episinus truncatus",
        "Eratigena atrica",
        "Eratigena feminea",
        "Eratigena inermis",
        "Eratigena montigena",
        "Eratigena picta",
        "Erigone dentipalpis",
        "Erigone promiscua",
        "Ero aphana",
        "Ero tuberculata",
        "Euophrys frontalis",
        "Euophrys rufibarbis",
        "Euophrys sulphurea",
        "Euryopis episinoides",
        "Euryopis sp. 430",
        "Eusparassus dufouri",
        "Evarcha jucunda",
        "Evarcha laetabunda",
        "Frontinellina frutetorum",
        "Gibbaranea bituberculata",
        "Gibbaranea gibbosa",
        "Gnaphosidae 464",
        "Hahnia candida",
        "Hahnia montana",
        "Hahnia nava",
        "Haplodrassus macellinus",
        "Haplodrassus minor",
        "Haplodrassus sp. 422",
        "Harpactea fageli",
        "Harpactea hombergi",
        "Harpactea minoccii",
        "Harpactea sp.",
        "Harpactea subiasi",
        "Harpactocrates sp. 442",
        "Heliophanus cupreus",
        "Heliophanus lineiventris",
        "Heliophanus rufithorax",
        "Heriaeus mellotteei",
        "Holocnemus hispanicus",
        "Hybocoptus corrugis",
        "Hypsosinga albovittata",
        "Hypsosinga sanguinea",
        "Hyptiotes paradoxus",
        "Iberesia machadoi",
        "Icius hamatus",
        "Kochiura aulica",
        "Labulla machadoi",
        "Lasaeola testaceomarginata",
        "Lasaeola tristis",
        "Lathys humilis",
        "Lathys sp. 436",
        "Lathys sp. 449",
        "Lepthyphantes minutus",
        "Leptodrassex simoni",
        "Leptodrassus albidus",
        "Leptodrassus femineus",
        "Leptorchestes peresi",
        "Leviellus kochi",
        "Linyphia maura",
        "Linyphiidae 428",
        "Linyphiidae 431",
        "Linyphiidae 446",
        "Linyphiidae 447",
        "Linyphiidae 454",
        "Linyphiidae 458",
        "Liocranum rupicola",
        "Liophrurillus flavitarsis",
        "Loxosceles rufescens",
        "Lycosa tarantula",
        "Lycosidae 440",
        "Macaroeris nidicolens",
        "Malthonica lusitanica",
        "Mangora acalypha",
        "Marilynia bicolor",
        "Mastigusa arietina",
        "Mesiotelus mauritanicus",
        "Metellina mengei",
        "Metellina merianae",
        "Micaria brignolii",
        "Micaria coarctata",
        "Micaria dives",
        "Micaria formicaria",
        "Micrargus sp. 368",
        "Microctenonyx subitaneus",
        "Microlinyphia pusilla",
        "Micrommata virescens",
        "Microneta viaria",
        "Misumena vatia",
        "Monaeses paradoxus",
        "Nemesia athiasi",
        "Nemesia bacelarae",
        "Nemesia ungoliant",
        "Neon levis",
        "Neoscona adianta",
        "Neottiura bimaculata",
        "Neottiura curvimana",
        "Neriene furtiva",
        "Neriene peltata",
        "Neriene radiata",
        "Nigma puella",
        "Nomisia excerpta",
        "Nomisia exornata",
        "Nuctenea umbratica",
        "Obscuriphantes obscurus",
        "Oecobius machadoi",
        "Olios argelasius",
        "Oonops sp.",
        "Ostearius melanopygius",
        "Oxyopes heterophthalmus",
        "Oxyopes lineatus",
        "Ozyptila atomaria",
        "Paidiscura pallens",
        "Palliduphantes stygius",
        "Palpimanus gibbulus",
        "Parasteatoda lunata",
        "Paratrachelas validus",
        "Pardosa hortensis",
        "Pardosa proxima",
        "Pardosa pullata",
        "Pelecopsis bucephala",
        "Pelecopsis inedita",
        "Pellenes nigrociliatus",
        "Peponocranium ludicrum",
        "Phaeocedus sp. 429",
        "Philodromus albidus",
        "Philodromus aureolus",
        "Philodromus buxi",
        "Philodromus cespitum",
        "Philodromus dispar",
        "Philodromus longipalpis",
        "Philodromus pulchellus",
        "Philodromus rufus",
        "Philodromus sp. 451",
        "Phlegra bresnieri",
        "Pholcomma gibbum",
        "Phoroncidia paradoxa",
        "Phrurolinillus lisboensis",
        "Phrurolithus cf. festivus",
        "Phrurolithus minimus",
        "Phrurolithus szilyi",
        "Phylloneta impressa",
        "Phylloneta sisyphia",
        "Pisaura mirabilis",
        "Pistius truncatus",
        "Platnickina nigropunctata",
        "Platnickina tincta",
        "Pocadicnemis pumila",
        "Poecilochroa senilis",
        "Polenecia producta",
        "Prinerigone vagans",
        "Pritha nana",
        "Pritha pallida",
        "Prodidomus amaranthinus",
        "Pseudeuophrys erratica",
        "Pseudicius encarpatus",
        "Pterotricha simoni",
        "Rhode scutiventris",
        "Rhomphaea nasica",
        "Rhomphaea rostrata",
        "Robertus sp. 460",
        "Runcinia grammica",
        "Salticidae 337",
        "Salticidae 441",
        "Salticus mutabilis",
        "Salticus propinquus",
        "Salticus scenicus",
        "Salticus zebraneus",
        "Sardinidion blackwalli",
        "Scotina celans",
        "Scotolathys simplex",
        "Scotophaeus blackwalli",
        "Scytodes velutina",
        "Segestria florentina",
        "Setaphis parvula",
        "Silhouettella loricatula",
        "Simitidion simile",
        "Singa neta",
        "Sintula sp.",
        "Sintula sp. 034",
        "Steatoda bipunctata",
        "Steatoda nobilis",
        "Steatoda triangulosa",
        "Styloctetor romanus",
        "Synageles venator",
        "Synema globosum",
        "Talavera petrensis",
        "Tegenaria ramblae",
        "Tenuiphantes tenuis",
        "Tenuiphantes zimmermanni",
        "Tetragnatha extensa",
        "Tetragnatha obtusa",
        "Tetragnatha sp.",
        "Textrix pinicola",
        "Thanatus vulgaris",
        "Theonina cornix",
        "Theridiidae 171",
        "Theridiidae 303",
        "Theridiidae 461",
        "Theridiidae 471",
        "Theridion hemerobium",
        "Theridion melanurum",
        "Theridion mystaceum",
        "Theridion pinastri",
        "Theridion sp. 378",
        "Theridion sp. 383",
        "Theridion sp. 459",
        "Theridion varians",
        "Thomisus onustus",
        "Thyene imperialis",
        "Tibellus oblongus",
        "Tiso vagans",
        "Tmarus piger",
        "Tmarus sp. 434",
        "Tmarus staintoni",
        "Tmarus stellio",
        "Trachyzelotes bardiae",
        "Trachyzelotes fuscipes",
        "Trachyzelotes holosericeus",
        "Trichoncus similipes",
        "Trichoncus trifidus",
        "Uloborus plumipes",
        "Uloborus walckenaerius",
        "Uroctea durandi",
        "Walckenaeria cf. dalmasi",
        "Xysticus acerbus",
        "Xysticus bliteus",
        "Xysticus bufo",
        "Xysticus cf. cribratus",
        "Xysticus cristatus",
        "Xysticus erraticus",
        "Xysticus ferrugineus",
        "Xysticus lanio",
        "Xysticus tortuosus",
        "Zelominor algarvensis",
        "Zelotes cf. flagellans",
        "Zelotes cf. gallicus",
        "Zelotes criniger",
        "Zelotes sp. 187",
        "Zelotes sp. 193",
        "Zelotes sp. 399",
        "Zelotes sp. 421",
        "Zelotes sp. 425",
        "Zelotes sp. 463",
        "Zelotes sp. 464",
        "Zelotes thorelli",
        "Zilla diodia",
        "Zodarion atlanticum",
        "Zodarion jozefienae",
        "Zodarion machadoi",
        "Zodarion merlijni",
        "Zodarion styliferum",
        "Zora spinimana",
        "Zoropsis spinimana"
      ],
      "rows": 320,
      "table": true,
      "tojson": true
    },
    {
      "name": "functree",
      "title": "Functional tree for 338 species of spiders",
      "object": "functree",
      "class": [
        "hclust"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "geres",
      "title": "Sample data of spiders in Geres (Portugal)",
      "object": "geres",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Aculepeira armida",
        "Aelurillus luctuosus",
        "Aelurillus v-insignitus",
        "Agalenatea redii",
        "Agroeca inopina",
        "Agyneta fuscipalpa",
        "Agyneta pseudorurestris",
        "Alopecosa albofasciata",
        "Alopecosa pulverulenta",
        "Alopecosa sp. 466",
        "Anelosimus pulchellus",
        "Anelosimus vittatus",
        "Anyphaena accentuata",
        "Anyphaena sabina",
        "Apostenus sp. 418",
        "Araeoncus humilis",
        "Araneus sturmi",
        "Araneus triguttatus",
        "Araniella cucurbitina",
        "Araniella opisthographa",
        "Archaeodictyna consecuta",
        "Arctosa leopardus",
        "Arctosa sp. 419",
        "Argyrodes argyrodes",
        "Ariadna insidiatrix",
        "Atypus affinis",
        "Ballus chalybeius",
        "Bassaniana versicolor",
        "Callilepis concolor",
        "Callilepis nocturna",
        "Callilepis schuszteri",
        "Callobius sp. 438",
        "Centromerus dilutus",
        "Centromerus sp. 443",
        "Cercidia prominens",
        "Cetonana sp. 456",
        "Chalcoscirtus infimus",
        "Cheiracanthium elegans",
        "Cheiracanthium sp. 208",
        "Cheiracanthium sp. 432",
        "Cheiracanthium striolatum",
        "Civizelotes medianus",
        "Clubiona brevipes",
        "Clubiona comta",
        "Clubiona corticalis",
        "Clubiona diniensis",
        "Clubiona genevensis",
        "Clubiona leucaspis",
        "Clubiona sp. 289",
        "Clubiona terrestris",
        "Crustulina guttata",
        "Cyclosa algerica",
        "Cyclosa conica",
        "Cyclosa insulana",
        "Cyrba algerina",
        "Cyrtophora citricola",
        "Diaea dorsata",
        "Dictyna civica",
        "Didectoprocnemis cirtensis",
        "Diplocephalus graecus",
        "Diplocephalus sp. 427",
        "Dipoena cf. nigroreticulata",
        "Dipoena erythropus",
        "Dipoena melanogaster",
        "Dipoena sp. 435",
        "Dipoena sp. 450",
        "Dipoena torva",
        "Drassodes fugax",
        "Drassodes lapidosus",
        "Drassodes lutescens",
        "Drassodes sp. 448",
        "Drassodes sp. 467",
        "Drassyllus sp. 444",
        "Dysdera alentejana",
        "Dysdera falciformis",
        "Dysdera fuscipes",
        "Dysdera lusitanica",
        "Dysdera machadoi",
        "Dysdera sp.",
        "Dysdera sp. 445",
        "Ebrechtella tricuspidata",
        "Echemus angustifrons",
        "Enoplognatha latimana",
        "Episinus angulatus",
        "Episinus maculipes",
        "Episinus truncatus",
        "Eratigena atrica",
        "Eratigena feminea",
        "Eratigena inermis",
        "Eratigena montigena",
        "Eratigena picta",
        "Erigone dentipalpis",
        "Erigone promiscua",
        "Ero aphana",
        "Ero tuberculata",
        "Euophrys frontalis",
        "Euophrys rufibarbis",
        "Euophrys sulphurea",
        "Euryopis episinoides",
        "Euryopis sp. 430",
        "Eusparassus dufouri",
        "Evarcha jucunda",
        "Evarcha laetabunda",
        "Frontinellina frutetorum",
        "Gibbaranea bituberculata",
        "Gibbaranea gibbosa",
        "Gnaphosidae 464",
        "Hahnia candida",
        "Hahnia montana",
        "Hahnia nava",
        "Haplodrassus macellinus",
        "Haplodrassus minor",
        "Haplodrassus sp. 422",
        "Harpactea fageli",
        "Harpactea hombergi",
        "Harpactea minoccii",
        "Harpactea sp.",
        "Harpactea subiasi",
        "Harpactocrates sp. 442",
        "Heliophanus cupreus",
        "Heliophanus lineiventris",
        "Heliophanus rufithorax",
        "Heriaeus mellotteei",
        "Holocnemus hispanicus",
        "Hybocoptus corrugis",
        "Hypsosinga albovittata",
        "Hypsosinga sanguinea",
        "Hyptiotes paradoxus",
        "Iberesia machadoi",
        "Icius hamatus",
        "Kochiura aulica",
        "Labulla machadoi",
        "Lasaeola testaceomarginata",
        "Lasaeola tristis",
        "Lathys humilis",
        "Lathys sp. 436",
        "Lathys sp. 449",
        "Lepthyphantes minutus",
        "Leptodrassex simoni",
        "Leptodrassus albidus",
        "Leptodrassus femineus",
        "Leptorchestes peresi",
        "Leviellus kochi",
        "Linyphia maura",
        "Linyphiidae 428",
        "Linyphiidae 431",
        "Linyphiidae 446",
        "Linyphiidae 447",
        "Linyphiidae 454",
        "Linyphiidae 458",
        "Liocranum rupicola",
        "Liophrurillus flavitarsis",
        "Loxosceles rufescens",
        "Lycosa tarantula",
        "Lycosidae 440",
        "Macaroeris nidicolens",
        "Malthonica lusitanica",
        "Mangora acalypha",
        "Marilynia bicolor",
        "Mastigusa arietina",
        "Mesiotelus mauritanicus",
        "Metellina mengei",
        "Metellina merianae",
        "Micaria brignolii",
        "Micaria coarctata",
        "Micaria dives",
        "Micaria formicaria",
        "Micrargus sp. 368",
        "Microctenonyx subitaneus",
        "Microlinyphia pusilla",
        "Micrommata virescens",
        "Microneta viaria",
        "Misumena vatia",
        "Monaeses paradoxus",
        "Nemesia athiasi",
        "Nemesia bacelarae",
        "Nemesia ungoliant",
        "Neon levis",
        "Neoscona adianta",
        "Neottiura bimaculata",
        "Neottiura curvimana",
        "Neriene furtiva",
        "Neriene peltata",
        "Neriene radiata",
        "Nigma puella",
        "Nomisia excerpta",
        "Nomisia exornata",
        "Nuctenea umbratica",
        "Obscuriphantes obscurus",
        "Oecobius machadoi",
        "Olios argelasius",
        "Oonops sp.",
        "Ostearius melanopygius",
        "Oxyopes heterophthalmus",
        "Oxyopes lineatus",
        "Ozyptila atomaria",
        "Paidiscura pallens",
        "Palliduphantes stygius",
        "Palpimanus gibbulus",
        "Parasteatoda lunata",
        "Paratrachelas validus",
        "Pardosa hortensis",
        "Pardosa proxima",
        "Pardosa pullata",
        "Pelecopsis bucephala",
        "Pelecopsis inedita",
        "Pellenes nigrociliatus",
        "Peponocranium ludicrum",
        "Phaeocedus sp. 429",
        "Philodromus albidus",
        "Philodromus aureolus",
        "Philodromus buxi",
        "Philodromus cespitum",
        "Philodromus dispar",
        "Philodromus longipalpis",
        "Philodromus pulchellus",
        "Philodromus rufus",
        "Philodromus sp. 451",
        "Phlegra bresnieri",
        "Pholcomma gibbum",
        "Phoroncidia paradoxa",
        "Phrurolinillus lisboensis",
        "Phrurolithus cf. festivus",
        "Phrurolithus minimus",
        "Phrurolithus szilyi",
        "Phylloneta impressa",
        "Phylloneta sisyphia",
        "Pisaura mirabilis",
        "Pistius truncatus",
        "Platnickina nigropunctata",
        "Platnickina tincta",
        "Pocadicnemis pumila",
        "Poecilochroa senilis",
        "Polenecia producta",
        "Prinerigone vagans",
        "Pritha nana",
        "Pritha pallida",
        "Prodidomus amaranthinus",
        "Pseudeuophrys erratica",
        "Pseudicius encarpatus",
        "Pterotricha simoni",
        "Rhode scutiventris",
        "Rhomphaea nasica",
        "Rhomphaea rostrata",
        "Robertus sp. 460",
        "Runcinia grammica",
        "Salticidae 337",
        "Salticidae 441",
        "Salticus mutabilis",
        "Salticus propinquus",
        "Salticus scenicus",
        "Salticus zebraneus",
        "Sardinidion blackwalli",
        "Scotina celans",
        "Scotolathys simplex",
        "Scotophaeus blackwalli",
        "Scytodes velutina",
        "Segestria florentina",
        "Setaphis parvula",
        "Silhouettella loricatula",
        "Simitidion simile",
        "Singa neta",
        "Sintula sp.",
        "Sintula sp. 034",
        "Steatoda bipunctata",
        "Steatoda nobilis",
        "Steatoda triangulosa",
        "Styloctetor romanus",
        "Synageles venator",
        "Synema globosum",
        "Talavera petrensis",
        "Tegenaria ramblae",
        "Tenuiphantes tenuis",
        "Tenuiphantes zimmermanni",
        "Tetragnatha extensa",
        "Tetragnatha obtusa",
        "Tetragnatha sp.",
        "Textrix pinicola",
        "Thanatus vulgaris",
        "Theonina cornix",
        "Theridiidae 171",
        "Theridiidae 303",
        "Theridiidae 461",
        "Theridiidae 471",
        "Theridion hemerobium",
        "Theridion melanurum",
        "Theridion mystaceum",
        "Theridion pinastri",
        "Theridion sp. 378",
        "Theridion sp. 383",
        "Theridion sp. 459",
        "Theridion varians",
        "Thomisus onustus",
        "Thyene imperialis",
        "Tibellus oblongus",
        "Tiso vagans",
        "Tmarus piger",
        "Tmarus sp. 434",
        "Tmarus staintoni",
        "Tmarus stellio",
        "Trachyzelotes bardiae",
        "Trachyzelotes fuscipes",
        "Trachyzelotes holosericeus",
        "Trichoncus similipes",
        "Trichoncus trifidus",
        "Uloborus plumipes",
        "Uloborus walckenaerius",
        "Uroctea durandi",
        "Walckenaeria cf. dalmasi",
        "Xysticus acerbus",
        "Xysticus bliteus",
        "Xysticus bufo",
        "Xysticus cf. cribratus",
        "Xysticus cristatus",
        "Xysticus erraticus",
        "Xysticus ferrugineus",
        "Xysticus lanio",
        "Xysticus tortuosus",
        "Zelominor algarvensis",
        "Zelotes cf. flagellans",
        "Zelotes cf. gallicus",
        "Zelotes criniger",
        "Zelotes sp. 187",
        "Zelotes sp. 193",
        "Zelotes sp. 399",
        "Zelotes sp. 421",
        "Zelotes sp. 425",
        "Zelotes sp. 463",
        "Zelotes sp. 464",
        "Zelotes thorelli",
        "Zilla diodia",
        "Zodarion atlanticum",
        "Zodarion jozefienae",
        "Zodarion machadoi",
        "Zodarion merlijni",
        "Zodarion styliferum",
        "Zora spinimana",
        "Zoropsis spinimana"
      ],
      "rows": 320,
      "table": true,
      "tojson": true
    },
    {
      "name": "guadiana",
      "title": "Sample data of spiders in Guadiana (Portugal)",
      "object": "guadiana",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Aculepeira armida",
        "Aelurillus luctuosus",
        "Aelurillus v-insignitus",
        "Agalenatea redii",
        "Agroeca inopina",
        "Agyneta fuscipalpa",
        "Agyneta pseudorurestris",
        "Alopecosa albofasciata",
        "Alopecosa pulverulenta",
        "Alopecosa sp. 466",
        "Anelosimus pulchellus",
        "Anelosimus vittatus",
        "Anyphaena accentuata",
        "Anyphaena sabina",
        "Apostenus sp. 418",
        "Araeoncus humilis",
        "Araneus sturmi",
        "Araneus triguttatus",
        "Araniella cucurbitina",
        "Araniella opisthographa",
        "Archaeodictyna consecuta",
        "Arctosa leopardus",
        "Arctosa sp. 419",
        "Argyrodes argyrodes",
        "Ariadna insidiatrix",
        "Atypus affinis",
        "Ballus chalybeius",
        "Bassaniana versicolor",
        "Callilepis concolor",
        "Callilepis nocturna",
        "Callilepis schuszteri",
        "Callobius sp. 438",
        "Centromerus dilutus",
        "Centromerus sp. 443",
        "Cercidia prominens",
        "Cetonana sp. 456",
        "Chalcoscirtus infimus",
        "Cheiracanthium elegans",
        "Cheiracanthium sp. 208",
        "Cheiracanthium sp. 432",
        "Cheiracanthium striolatum",
        "Civizelotes medianus",
        "Clubiona brevipes",
        "Clubiona comta",
        "Clubiona corticalis",
        "Clubiona diniensis",
        "Clubiona genevensis",
        "Clubiona leucaspis",
        "Clubiona sp. 289",
        "Clubiona terrestris",
        "Crustulina guttata",
        "Cyclosa algerica",
        "Cyclosa conica",
        "Cyclosa insulana",
        "Cyrba algerina",
        "Cyrtophora citricola",
        "Diaea dorsata",
        "Dictyna civica",
        "Didectoprocnemis cirtensis",
        "Diplocephalus graecus",
        "Diplocephalus sp. 427",
        "Dipoena cf. nigroreticulata",
        "Dipoena erythropus",
        "Dipoena melanogaster",
        "Dipoena sp. 435",
        "Dipoena sp. 450",
        "Dipoena torva",
        "Drassodes fugax",
        "Drassodes lapidosus",
        "Drassodes lutescens",
        "Drassodes sp. 448",
        "Drassodes sp. 467",
        "Drassyllus sp. 444",
        "Dysdera alentejana",
        "Dysdera falciformis",
        "Dysdera fuscipes",
        "Dysdera lusitanica",
        "Dysdera machadoi",
        "Dysdera sp.",
        "Dysdera sp. 445",
        "Ebrechtella tricuspidata",
        "Echemus angustifrons",
        "Enoplognatha latimana",
        "Episinus angulatus",
        "Episinus maculipes",
        "Episinus truncatus",
        "Eratigena atrica",
        "Eratigena feminea",
        "Eratigena inermis",
        "Eratigena montigena",
        "Eratigena picta",
        "Erigone dentipalpis",
        "Erigone promiscua",
        "Ero aphana",
        "Ero tuberculata",
        "Euophrys frontalis",
        "Euophrys rufibarbis",
        "Euophrys sulphurea",
        "Euryopis episinoides",
        "Euryopis sp. 430",
        "Eusparassus dufouri",
        "Evarcha jucunda",
        "Evarcha laetabunda",
        "Frontinellina frutetorum",
        "Gibbaranea bituberculata",
        "Gibbaranea gibbosa",
        "Gnaphosidae 464",
        "Hahnia candida",
        "Hahnia montana",
        "Hahnia nava",
        "Haplodrassus macellinus",
        "Haplodrassus minor",
        "Haplodrassus sp. 422",
        "Harpactea fageli",
        "Harpactea hombergi",
        "Harpactea minoccii",
        "Harpactea sp.",
        "Harpactea subiasi",
        "Harpactocrates sp. 442",
        "Heliophanus cupreus",
        "Heliophanus lineiventris",
        "Heliophanus rufithorax",
        "Heriaeus mellotteei",
        "Holocnemus hispanicus",
        "Hybocoptus corrugis",
        "Hypsosinga albovittata",
        "Hypsosinga sanguinea",
        "Hyptiotes paradoxus",
        "Iberesia machadoi",
        "Icius hamatus",
        "Kochiura aulica",
        "Labulla machadoi",
        "Lasaeola testaceomarginata",
        "Lasaeola tristis",
        "Lathys humilis",
        "Lathys sp. 436",
        "Lathys sp. 449",
        "Lepthyphantes minutus",
        "Leptodrassex simoni",
        "Leptodrassus albidus",
        "Leptodrassus femineus",
        "Leptorchestes peresi",
        "Leviellus kochi",
        "Linyphia maura",
        "Linyphiidae 428",
        "Linyphiidae 431",
        "Linyphiidae 446",
        "Linyphiidae 447",
        "Linyphiidae 454",
        "Linyphiidae 458",
        "Liocranum rupicola",
        "Liophrurillus flavitarsis",
        "Loxosceles rufescens",
        "Lycosa tarantula",
        "Lycosidae 440",
        "Macaroeris nidicolens",
        "Malthonica lusitanica",
        "Mangora acalypha",
        "Marilynia bicolor",
        "Mastigusa arietina",
        "Mesiotelus mauritanicus",
        "Metellina mengei",
        "Metellina merianae",
        "Micaria brignolii",
        "Micaria coarctata",
        "Micaria dives",
        "Micaria formicaria",
        "Micrargus sp. 368",
        "Microctenonyx subitaneus",
        "Microlinyphia pusilla",
        "Micrommata virescens",
        "Microneta viaria",
        "Misumena vatia",
        "Monaeses paradoxus",
        "Nemesia athiasi",
        "Nemesia bacelarae",
        "Nemesia ungoliant",
        "Neon levis",
        "Neoscona adianta",
        "Neottiura bimaculata",
        "Neottiura curvimana",
        "Neriene furtiva",
        "Neriene peltata",
        "Neriene radiata",
        "Nigma puella",
        "Nomisia excerpta",
        "Nomisia exornata",
        "Nuctenea umbratica",
        "Obscuriphantes obscurus",
        "Oecobius machadoi",
        "Olios argelasius",
        "Oonops sp.",
        "Ostearius melanopygius",
        "Oxyopes heterophthalmus",
        "Oxyopes lineatus",
        "Ozyptila atomaria",
        "Paidiscura pallens",
        "Palliduphantes stygius",
        "Palpimanus gibbulus",
        "Parasteatoda lunata",
        "Paratrachelas validus",
        "Pardosa hortensis",
        "Pardosa proxima",
        "Pardosa pullata",
        "Pelecopsis bucephala",
        "Pelecopsis inedita",
        "Pellenes nigrociliatus",
        "Peponocranium ludicrum",
        "Phaeocedus sp. 429",
        "Philodromus albidus",
        "Philodromus aureolus",
        "Philodromus buxi",
        "Philodromus cespitum",
        "Philodromus dispar",
        "Philodromus longipalpis",
        "Philodromus pulchellus",
        "Philodromus rufus",
        "Philodromus sp. 451",
        "Phlegra bresnieri",
        "Pholcomma gibbum",
        "Phoroncidia paradoxa",
        "Phrurolinillus lisboensis",
        "Phrurolithus cf. festivus",
        "Phrurolithus minimus",
        "Phrurolithus szilyi",
        "Phylloneta impressa",
        "Phylloneta sisyphia",
        "Pisaura mirabilis",
        "Pistius truncatus",
        "Platnickina nigropunctata",
        "Platnickina tincta",
        "Pocadicnemis pumila",
        "Poecilochroa senilis",
        "Polenecia producta",
        "Prinerigone vagans",
        "Pritha nana",
        "Pritha pallida",
        "Prodidomus amaranthinus",
        "Pseudeuophrys erratica",
        "Pseudicius encarpatus",
        "Pterotricha simoni",
        "Rhode scutiventris",
        "Rhomphaea nasica",
        "Rhomphaea rostrata",
        "Robertus sp. 460",
        "Runcinia grammica",
        "Salticidae 337",
        "Salticidae 441",
        "Salticus mutabilis",
        "Salticus propinquus",
        "Salticus scenicus",
        "Salticus zebraneus",
        "Sardinidion blackwalli",
        "Scotina celans",
        "Scotolathys simplex",
        "Scotophaeus blackwalli",
        "Scytodes velutina",
        "Segestria florentina",
        "Setaphis parvula",
        "Silhouettella loricatula",
        "Simitidion simile",
        "Singa neta",
        "Sintula sp.",
        "Sintula sp. 034",
        "Steatoda bipunctata",
        "Steatoda nobilis",
        "Steatoda triangulosa",
        "Styloctetor romanus",
        "Synageles venator",
        "Synema globosum",
        "Talavera petrensis",
        "Tegenaria ramblae",
        "Tenuiphantes tenuis",
        "Tenuiphantes zimmermanni",
        "Tetragnatha extensa",
        "Tetragnatha obtusa",
        "Tetragnatha sp.",
        "Textrix pinicola",
        "Thanatus vulgaris",
        "Theonina cornix",
        "Theridiidae 171",
        "Theridiidae 303",
        "Theridiidae 461",
        "Theridiidae 471",
        "Theridion hemerobium",
        "Theridion melanurum",
        "Theridion mystaceum",
        "Theridion pinastri",
        "Theridion sp. 378",
        "Theridion sp. 383",
        "Theridion sp. 459",
        "Theridion varians",
        "Thomisus onustus",
        "Thyene imperialis",
        "Tibellus oblongus",
        "Tiso vagans",
        "Tmarus piger",
        "Tmarus sp. 434",
        "Tmarus staintoni",
        "Tmarus stellio",
        "Trachyzelotes bardiae",
        "Trachyzelotes fuscipes",
        "Trachyzelotes holosericeus",
        "Trichoncus similipes",
        "Trichoncus trifidus",
        "Uloborus plumipes",
        "Uloborus walckenaerius",
        "Uroctea durandi",
        "Walckenaeria cf. dalmasi",
        "Xysticus acerbus",
        "Xysticus bliteus",
        "Xysticus bufo",
        "Xysticus cf. cribratus",
        "Xysticus cristatus",
        "Xysticus erraticus",
        "Xysticus ferrugineus",
        "Xysticus lanio",
        "Xysticus tortuosus",
        "Zelominor algarvensis",
        "Zelotes cf. flagellans",
        "Zelotes cf. gallicus",
        "Zelotes criniger",
        "Zelotes sp. 187",
        "Zelotes sp. 193",
        "Zelotes sp. 399",
        "Zelotes sp. 421",
        "Zelotes sp. 425",
        "Zelotes sp. 463",
        "Zelotes sp. 464",
        "Zelotes thorelli",
        "Zilla diodia",
        "Zodarion atlanticum",
        "Zodarion jozefienae",
        "Zodarion machadoi",
        "Zodarion merlijni",
        "Zodarion styliferum",
        "Zora spinimana",
        "Zoropsis spinimana"
      ],
      "rows": 192,
      "table": true,
      "tojson": true
    },
    {
      "name": "phylotree",
      "title": "Taxonomic tree for 338 species of spiders (surrogate for phylogeny)",
      "object": "phylotree",
      "class": [
        "hclust"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "accuracy",
      "title": "Scaled mean squared error of accumulation curves.",
      "topics": [
        "accuracy"
      ]
    },
    {
      "page": "aic",
      "title": "Akaike Information Criterion.",
      "topics": [
        "aic"
      ]
    },
    {
      "page": "alpha",
      "title": "Auxiliary function, used only internally Alpha diversity (Taxon, Phylogenetic or Functional Diversity - TD, PD, FD).",
      "topics": [
        "alpha"
      ]
    },
    {
      "page": "alpha.accum",
      "title": "Alpha diversity accumulation curves (observed and estimated).",
      "topics": [
        "alpha.accum"
      ]
    },
    {
      "page": "alpha.estimate",
      "title": "Alpha diversity estimates.",
      "topics": [
        "alpha.estimate"
      ]
    },
    {
      "page": "arrabida",
      "title": "Sample data of spiders in Arrabida (Portugal)",
      "topics": [
        "arrabida"
      ]
    },
    {
      "page": "beta",
      "title": "Beta diversity (Taxon, Phylogenetic or Functional Diversity - TD, PD, FD).",
      "topics": [
        "beta"
      ]
    },
    {
      "page": "beta.accum",
      "title": "Beta diversity accumulation curves.",
      "topics": [
        "beta.accum"
      ]
    },
    {
      "page": "beta.evenness",
      "title": "Beta diversity evenness (Taxon, Phylogenetic or Functional Diversity - TD, PD, FD).",
      "topics": [
        "beta.evenness"
      ]
    },
    {
      "page": "beta.multi",
      "title": "Beta diversity among multiple communities.",
      "topics": [
        "beta.multi"
      ]
    },
    {
      "page": "contribution",
      "title": "Contribution of species or individuals to total phylogenetic/functional diversity.",
      "topics": [
        "contribution"
      ]
    },
    {
      "page": "coverage",
      "title": "Coverage of datasets.",
      "topics": [
        "coverage"
      ]
    },
    {
      "page": "cwd",
      "title": "Community Weighted Dispersion.",
      "topics": [
        "cwd"
      ]
    },
    {
      "page": "cwe",
      "title": "Community Weighted Evenness.",
      "topics": [
        "cwe"
      ]
    },
    {
      "page": "cwm",
      "title": "Community Weighted Mean.",
      "topics": [
        "cwm"
      ]
    },
    {
      "page": "dispersion",
      "title": "Phylogenetic/functional dispersion of species or individuals.",
      "topics": [
        "dispersion"
      ]
    },
    {
      "page": "dummy",
      "title": "Dummify variables.",
      "topics": [
        "dummy"
      ]
    },
    {
      "page": "evenness",
      "title": "Taxonomic/phylogenetic/functional evenness of species or individuals.",
      "topics": [
        "evenness"
      ]
    },
    {
      "page": "evenness.contribution",
      "title": "Contribution of each species or individual to the total taxonomic/phylogenetic/functional evenness.",
      "topics": [
        "evenness.contribution"
      ]
    },
    {
      "page": "fill",
      "title": "Filling missing data.",
      "topics": [
        "fill"
      ]
    },
    {
      "page": "functree",
      "title": "Functional tree for 338 species of spiders",
      "topics": [
        "functree"
      ]
    },
    {
      "page": "gamma",
      "title": "Gamma diversity (Taxon, Phylogenetic or Functional Diversity - TD, PD, FD).",
      "topics": [
        "gamma"
      ]
    },
    {
      "page": "gdm",
      "title": "General dynamic model of oceanic island biogeography (GDM).",
      "topics": [
        "gdm"
      ]
    },
    {
      "page": "geres",
      "title": "Sample data of spiders in Geres (Portugal)",
      "topics": [
        "geres"
      ]
    },
    {
      "page": "gower",
      "title": "Gower distance.",
      "topics": [
        "gower"
      ]
    },
    {
      "page": "guadiana",
      "title": "Sample data of spiders in Guadiana (Portugal)",
      "topics": [
        "guadiana"
      ]
    },
    {
      "page": "hill",
      "title": "Hill numbers.",
      "topics": [
        "hill"
      ]
    },
    {
      "page": "hull.alpha",
      "title": "Alpha diversity using convex hull hypervolumes.",
      "topics": [
        "hull.alpha"
      ]
    },
    {
      "page": "hull.beta",
      "title": "Beta diversity partitioning using convex hull hypervolumes.",
      "topics": [
        "hull.beta"
      ]
    },
    {
      "page": "hull.build",
      "title": "Build convex hull hypervolumes.",
      "topics": [
        "hull.build"
      ]
    },
    {
      "page": "hull.contribution",
      "title": "Contribution of each observation to a convex hull hypervolume.",
      "topics": [
        "hull.contribution"
      ]
    },
    {
      "page": "hull.gamma",
      "title": "Gamma diversity using convex hull hypervolumes.",
      "topics": [
        "hull.gamma"
      ]
    },
    {
      "page": "hull.sad",
      "title": "Species-abundance distribution (SAD) using convex hulls.",
      "topics": [
        "hull.sad"
      ]
    },
    {
      "page": "hyper.arrangement",
      "title": "Functional arrangement within a functional space (generic function).",
      "topics": [
        "hyper.arrangement"
      ]
    },
    {
      "page": "hyper.build",
      "title": "Build hyperspace.",
      "topics": [
        "hyper.build"
      ]
    },
    {
      "page": "hyper.quality",
      "title": "Quality of hyperspace.",
      "topics": [
        "hyper.quality"
      ]
    },
    {
      "page": "iaor",
      "title": "Interspecific abundance-occupancy relationship (IAOR).",
      "topics": [
        "iaor"
      ]
    },
    {
      "page": "kernel.alpha",
      "title": "Alpha diversity using kernel density hypervolumes.",
      "topics": [
        "kernel.alpha"
      ]
    },
    {
      "page": "kernel.arrangement",
      "title": "Functional arrangement of kernel density hypervolumes.",
      "topics": [
        "kernel.arrangement"
      ]
    },
    {
      "page": "kernel.bandwidth",
      "title": "Kernel bandwidth estimation by median heuristic method with bootstrap CI",
      "topics": [
        "kernel.bandwidth"
      ]
    },
    {
      "page": "kernel.beta",
      "title": "Beta diversity partitioning using kernel density hypervolumes.",
      "topics": [
        "kernel.beta"
      ]
    },
    {
      "page": "kernel.beta.evenness",
      "title": "Functional beta diversity evenness using kernel density hypervolumes.",
      "topics": [
        "kernel.beta.evenness"
      ]
    },
    {
      "page": "kernel.build",
      "title": "Build kernel hypervolumes.",
      "topics": [
        "kernel.build"
      ]
    },
    {
      "page": "kernel.contribution",
      "title": "Contribution of each observation to the kernel density hypervolume.",
      "topics": [
        "kernel.contribution"
      ]
    },
    {
      "page": "kernel.dispersion",
      "title": "Functional dispersion of kernel density hypervolumes.",
      "topics": [
        "kernel.dispersion"
      ]
    },
    {
      "page": "kernel.evenness",
      "title": "Functional evenness of kernel density hypervolumes.",
      "topics": [
        "kernel.evenness"
      ]
    },
    {
      "page": "kernel.evenness.contribution",
      "title": "Contribution of each observation to the evenness of a kernel density hypervolume.",
      "topics": [
        "kernel.evenness.contribution"
      ]
    },
    {
      "page": "kernel.gamma",
      "title": "Gamma diversity using kernel density hypervolumes.",
      "topics": [
        "kernel.gamma"
      ]
    },
    {
      "page": "kernel.hotspots",
      "title": "Hotspots in hypervolumes.",
      "topics": [
        "kernel.hotspots"
      ]
    },
    {
      "page": "kernel.originality",
      "title": "Functional originality of observations in kernel density hypervolumes.",
      "topics": [
        "kernel.originality"
      ]
    },
    {
      "page": "kernel.sad",
      "title": "Species-abundance distribution (SAD) using kernel density hypervolumes.",
      "topics": [
        "kernel.sad"
      ]
    },
    {
      "page": "kernel.similarity",
      "title": "Pairwise similarity among kernel density hypervolumes.",
      "topics": [
        "kernel.similarity"
      ]
    },
    {
      "page": "linnean",
      "title": "Create Linnean tree.",
      "topics": [
        "linnean"
      ]
    },
    {
      "page": "mixture",
      "title": "Mixture model.",
      "topics": [
        "mixture"
      ]
    },
    {
      "page": "optim.alpha",
      "title": "Optimization of alpha diversity sampling protocols.",
      "topics": [
        "optim.alpha"
      ]
    },
    {
      "page": "optim.alpha.stats",
      "title": "Efficiency statistics for alpha-sampling.",
      "topics": [
        "optim.alpha.stats"
      ]
    },
    {
      "page": "optim.beta",
      "title": "Optimization of beta diversity sampling protocols.",
      "topics": [
        "optim.beta"
      ]
    },
    {
      "page": "optim.beta.stats",
      "title": "Efficiency statistics for beta-sampling.",
      "topics": [
        "optim.beta.stats"
      ]
    },
    {
      "page": "optim.spatial",
      "title": "Optimization of spatial sampling.",
      "topics": [
        "optim.spatial"
      ]
    },
    {
      "page": "originality",
      "title": "Phylogenetic/functional originality of species or individuals.",
      "topics": [
        "originality"
      ]
    },
    {
      "page": "phylotree",
      "title": "Taxonomic tree for 338 species of spiders (surrogate for phylogeny)",
      "topics": [
        "phylotree"
      ]
    },
    {
      "page": "r2",
      "title": "Model R2.",
      "topics": [
        "r2"
      ]
    },
    {
      "page": "rao",
      "title": "Rao quadratic entropy.",
      "topics": [
        "rao"
      ]
    },
    {
      "page": "raster.alpha",
      "title": "Maps of alpha diversity (Taxon, Phylogenetic or Functional Diversity - TD, PD, FD).",
      "topics": [
        "raster.alpha"
      ]
    },
    {
      "page": "raster.beta",
      "title": "Maps of beta diversity (Taxon, Phylogenetic or Functional Diversity - TD, PD, FD).",
      "topics": [
        "raster.beta"
      ]
    },
    {
      "page": "raster.dispersion",
      "title": "Maps of phylogenetic/functional dispersion of species or individuals.",
      "topics": [
        "raster.dispersion"
      ]
    },
    {
      "page": "raster.evenness",
      "title": "Maps of phylogenetic/functional evenness of species or individuals.",
      "topics": [
        "raster.evenness"
      ]
    },
    {
      "page": "sad",
      "title": "Species-abundance distribution (SAD).",
      "topics": [
        "sad"
      ]
    },
    {
      "page": "sar",
      "title": "Species-area relationship (SAR).",
      "topics": [
        "sar"
      ]
    },
    {
      "page": "ses",
      "title": "Standard Effect Size.",
      "topics": [
        "ses"
      ]
    },
    {
      "page": "sim.plot",
      "title": "Plots of simulated species spatial distributions.",
      "topics": [
        "sim.plot"
      ]
    },
    {
      "page": "sim.sad",
      "title": "Simulation of species abundance distributions (SAD).",
      "topics": [
        "sim.sad"
      ]
    },
    {
      "page": "sim.sample",
      "title": "Simulation of sampling from artificial communities.",
      "topics": [
        "sim.sample"
      ]
    },
    {
      "page": "sim.spatial",
      "title": "Simulation of species spatial distributions.",
      "topics": [
        "sim.spatial"
      ]
    },
    {
      "page": "sim.tree",
      "title": "Simulation of phylogenetic or functional tree.",
      "topics": [
        "sim.tree"
      ]
    },
    {
      "page": "slope",
      "title": "Slope of accumulation curves.",
      "topics": [
        "slope"
      ]
    },
    {
      "page": "standard",
      "title": "Standardize variables.",
      "topics": [
        "standard"
      ]
    },
    {
      "page": "tree.addTip",
      "title": "Add tips to a tree.",
      "topics": [
        "tree.addTip"
      ]
    },
    {
      "page": "tree.build",
      "title": "Build functional tree.",
      "topics": [
        "tree.build"
      ]
    },
    {
      "page": "tree.quality",
      "title": "Quality of tree.",
      "topics": [
        "tree.quality"
      ]
    },
    {
      "page": "tree.zero",
      "title": "Convert negative branches of tree.",
      "topics": [
        "tree.zero"
      ]
    },
    {
      "page": "uniqueness",
      "title": "Phylogenetic/functional uniqueness of species.",
      "topics": [
        "uniqueness"
      ]
    }
  ],
  "_rundeps": [
    "abind",
    "ape",
    "bit",
    "bit64",
    "boot",
    "caret",
    "class",
    "cli",
    "clock",
    "cluster",
    "clusterGeneration",
    "coda",
    "codetools",
    "combinat",
    "cpp11",
    "crayon",
    "data.table",
    "DEoptim",
    "diagram",
    "digest",
    "doParallel",
    "dplyr",
    "e1071",
    "expm",
    "farver",
    "fastcluster",
    "fastmatch",
    "FNN",
    "foreach",
    "future",
    "future.apply",
    "generics",
    "geometry",
    "ggplot2",
    "globals",
    "glue",
    "gower",
    "gtable",
    "hardhat",
    "hitandrun",
    "hms",
    "hypervolume",
    "igraph",
    "ipred",
    "isoband",
    "iterators",
    "kernlab",
    "KernSmooth",
    "ks",
    "labeling",
    "lattice",
    "lava",
    "lifecycle",
    "linprog",
    "listenv",
    "lpSolve",
    "lubridate",
    "magic",
    "magrittr",
    "maps",
    "MASS",
    "Matrix",
    "mclust",
    "mgcv",
    "mnormt",
    "ModelMetrics",
    "multicool",
    "mvtnorm",
    "nlme",
    "nls2",
    "nnet",
    "numDeriv",
    "optimParallel",
    "palmerpenguins",
    "parallelly",
    "pbapply",
    "pdist",
    "permute",
    "phangorn",
    "phytools",
    "pillar",
    "pkgconfig",
    "PlotTools",
    "plyr",
    "pracma",
    "prettyunits",
    "pROC",
    "prodlim",
    "progress",
    "progressr",
    "proto",
    "proxy",
    "purrr",
    "quadprog",
    "R6",
    "raster",
    "rbibutils",
    "rcdd",
    "RColorBrewer",
    "Rcpp",
    "RcppArmadillo",
    "RcppProgress",
    "Rdpack",
    "recipes",
    "reshape2",
    "rlang",
    "rpart",
    "S7",
    "scales",
    "scatterplot3d",
    "shape",
    "sp",
    "sparsevctrs",
    "SQUAREM",
    "stringi",
    "stringr",
    "survival",
    "terra",
    "tibble",
    "tidyr",
    "tidyselect",
    "timechange",
    "timeDate",
    "TreeTools",
    "tzdb",
    "utf8",
    "vctrs",
    "vegan",
    "viridisLite",
    "withr"
  ],
  "_score": 4.731959248048951,
  "_indexed": true,
  "_nocasepkg": "bat",
  "_universes": [
    "cardosopmb"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "2.11.1",
      "date": "2026-05-20T10:12:07.000Z",
      "distro": "noble",
      "commit": "ef56ebda8a77810795e58385f52253b45478b72d",
      "fileid": "16e2200570231173f1c5b551ef5863774791a24a3e66b5fd1f22f9d7fe75ad4a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cardosopmb/actions/runs/26155630915"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "2.11.1",
      "date": "2026-05-20T10:12:26.000Z",
      "distro": "noble",
      "commit": "ef56ebda8a77810795e58385f52253b45478b72d",
      "fileid": "406c27649b8a6f06d1d6da8ed88fba22d61c57c35b995cbee3245972bbcff877",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cardosopmb/actions/runs/26155630915"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "2.11.1",
      "date": "2026-05-20T10:11:34.000Z",
      "commit": "ef56ebda8a77810795e58385f52253b45478b72d",
      "fileid": "98b7d4d5d2576bea7d043fd9d8affa291c45af07d3437fda4cc728b518a2958d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cardosopmb/actions/runs/26155630915"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "2.11.1",
      "date": "2026-05-20T10:11:21.000Z",
      "commit": "ef56ebda8a77810795e58385f52253b45478b72d",
      "fileid": "8a80c9f22ca7e803728f3d36e2ad1d61972cfa188ba281cd295a49d7289c19d5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cardosopmb/actions/runs/26155630915"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "2.11.1",
      "date": "2026-05-20T10:12:27.000Z",
      "commit": "ef56ebda8a77810795e58385f52253b45478b72d",
      "fileid": "70485e2199710c850a36209e063c8f6f5fff73ff1a3169b4d2effee440caf173",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cardosopmb/actions/runs/26155630915"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "2.11.1",
      "date": "2026-05-20T10:11:13.000Z",
      "commit": "ef56ebda8a77810795e58385f52253b45478b72d",
      "fileid": "563880f125b6b8672457bcaa3351e9f281c11b839c5bd078bacfd8f720132321",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cardosopmb/actions/runs/26155630915"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "2.11.1",
      "date": "2026-05-20T10:11:32.000Z",
      "commit": "ef56ebda8a77810795e58385f52253b45478b72d",
      "fileid": "5e925d9b7188ef2ba8d7134208970e97efa171650ec99a139a5cc0350ed664bd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cardosopmb/actions/runs/26155630915"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "2.11.1",
      "date": "2026-06-02T13:13:38.000Z",
      "commit": "ef56ebda8a77810795e58385f52253b45478b72d",
      "fileid": "0262c8897a16ce35940dfeb736a3b6fb6016c721e08ed05d9e29973937f9d18b",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cardosopmb/actions/runs/26155630915"
    }
  ]
}